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Fixing Software Setup Mistakes in Real-Time PCR (SetpOnePlus) - AskTaqMan - Ep 10
Thermo Fisher Scientific Sr. Field Application Specialist Doug Rains offers advice for fixing common software set-up mistakes when performing Real-Time PCR.
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      1. Now Playing
        Up NextFixing Software Setup Mistakes in Real-Time PCR (SetpOnePlus) - AskTaqMan - Ep 10

        Thermo Fisher Scientific Sr. Field Application Specialist Doug Rains offers advice for fixing common software set-up mistakes when performing Real-Time PCR.

      2. Now Playing
        Up NextCopy Number Variation – How Does It Work? - Ask TaqMan #34

        Copy number variation (CNV) is a type of structural variation that occurs when a DNA segment of 1 kb to several megabases in length is present in variable copy numbers compared to a reference genome

      3. Now Playing
        Up NextHow to Label Technical Replicates in Thermo Fisher Scientific Real-Time PCR Software - Ask TaqMan Episode 1

        For the uninitiated, when we say "technical replicates," we're referring to wells that contain exactly the same amount of the same sample, amplified with the same Assay.

      4. Now Playing
        Up NextHints for Real-Time PCR (qPCR) Assay Design - Ask TaqMan Episode 2

        You might be asking yourself "Do I need to do anything special?" First off, size definitely matters when it comes to amplicons in real-time PCR.

      5. Now Playing
        Up NextWhich Quencher Molecule is Best for TaqMan Probes in Real-Time PCR? -- Ask TaqMan Episode 3

        Applied Biosystems real-time instruments officially support two different quenchers, the first of which is an oldie but goodie called TAMRA dye. TAMRA dye has been around for a long time, and it's still widely available.

      6. Now Playing
        Up NextBaselines in Real-Time PCR – Ask TaqMan Ep 5

        After introducing MIQE guidelines, a set of standards for producing and publishing qPCR data, Sr. Field Application Specialist Doug Rains explains the baselines in Real-Time PCR.

      7. Now Playing
        Up NextReal-Time PCR Thresholds and Where to Place Them -- Ask TaqMan- Ep. 6

        The threshold is a horizontal line in our amplification plot that can be moved up or down on the Y-axis. Its purpose? As we'll see in a minute, it tells the software where to take data. Of course, not all places on the Y-axis are equal.

      8. Now Playing
        Up NextFinding Multiple Melt-Curve Peaks When Using SYBR Green in Real-Time PCR - Ask TaqMan - Ep. 8

        The causes of multiple peaks in a melt curve when using SYBR Green dye in Real-Time PCR. SYBR Green I chemistry is a free-floating dye. Here's how it works.

      9. Now Playing
        Up NextPhases of Real-Time PCR and Why They're Important – Ask TaqMan Episode 9

        But it's normally difficult to see PCR's phases in action. That said, once we do real-time PCR, we can easily visualize its phases. Fortunately, real-time is where PCR phases really matter.

      10. Now Playing
        Up NextAdvantages-Disadvantages of Singleplex - Ask TaqMan Ep14

        Ask TaqMan answers the question about the advantages and disadvantages of singleplex.

      11. Now Playing
        Up NextHow to Normalize cDNA Concentrations - Ask TaqMan Episode 15

        Doug provides a helpful reference document which explains in detail how researchers can quantitatively validate their choice of a control gene.

      12. Now Playing
        Up NextHow to Optimize Multiplex qPCR Experiments – Ask TaqMan Ep. 18 by Life Technologies

        This is a short video showing how to improve protein expression yields with GeneArt Gene Synthesis and Gateway expression vectors.

      13. Now Playing
        Up NextDo TaqMan Assays Comply with MIQE Guidelines? - Ask TaqMan Episode 19

        Rains explains how large and diverse collection of TaqMan assays comply with these guidelines.

      14. Now Playing
        Up NextChoosing the Right TaqMan Assay - Ask TaqMan Ep20

        In this video, learn how to make an informed choice about which of the millions of Thermo Fishers' assays are most appropriate for experimental needs.

      15. Now Playing
        Up NextHow to Analyze Real-time PCR Data - Ask TaqMan Episode 16

        In this video, Sr. Field Applications Specialist Doug Rains covers the various options that researchers have for performing final qPCR data calculations.

      16. Now Playing
        Up NextHow to Improve Real-time PCR Reaction Sensitivity -- Ask TaqMan Episode 12

        This video looks at improving sample recovery, as well as discusses specialized kits designed to maximize template isolation. Finally, the video explores a novel and highly quantitative strategy for pre-amplification of limited template.

      17. Now Playing
        Up NextHow TaqMan Works - Ask TaqMan Ep. 13

        Sr. Field Applications Specialist Doug Rains explores the specific mechanism by which TaqMan® achieves its unparalleled specificity and sensitivity.

      18. Now Playing
        Up NextReal-time PCR Applications - Ask TaqMan Episode 17

        In this video, Sr. Field Applications Specialist Doug Rains covers several possible applications that are possible on real-time PCR instruments.

      19. Now Playing
        Up NextShould You Dilute cDNA for Real-time PCR? - Ask TaqMan Episode 11

        This video also looks at the possible need to dilute RNA prior to reverse transcription. This takes into consideration a host of scenarios including final reaction volume, expression level of genes under study.

      20. Now Playing
        Up NextFinding The Right MicroRNA (miRNA) Assays - Ask TaqMan #31

        MicroRNAs are small and around 22 nucleotide noncoding RNAs that regulate gene expression. Due to their small size, the measurement of miRNAs presents some special challenges.

      21. Now Playing
        Up NextGetting Reliable Data in qPCR - Ask TaqMan #22

        At the end of the day you want to be able to write up your results and know the changes you see are real -- and not the result of handling or pipeting error.

      22. Now Playing
        Up NextHomozygous vs. Heterozygous Samples in qPCR - Ask TaqMan #23

        Did you know that TaqMan assays can also be used for SNP Genotyping? While the assays use the same robust TaqMan chemistry, they contain two probes, and thus analysis is different than when using a Gene Expression assay.

      23. Now Playing
        Up NextHow to Measure PCR Efficiency of an Assay - Ask TaqMan Episode 4

        To check the efficiency of an assay, you need to run a template dilution curve in real-time, and then look at the resulting slope of that curve.

      24. Now Playing
        Up NextHow TaqMan Works - Ask TaqMan episode 13

        How TaqMan Assays amplify target sequences by real-time PCR.

      25. Now Playing
        Up NextOver 100% Assay Efficiency in qPCR? Not so fast. — Ask TaqMan Ep. 21

        In another Ask TaqMan video, we discussed assay efficiency and how to calculate it. But how does efficiency really impact our experiments, or as Julie Kase at George Washington University asks, why is it important?

      26. Now Playing
        Up NextEndogenous Controls in qPCR - Ask TaqMan #24

        If you are studying gene expression by real-time PCR, then you are likely using relative quantitation or comparative Ct method.

      27. Now Playing
        Up NextWhat is the Right RT Method for Your Experiment? Ask TaqMan #37

        There are two primary approaches to reverse transcription for qPCR known informally as two-step or one-step methods. Learn about both methods and when they are recommended.

      28. Now Playing
        Up NextCopy Number Variation – How Does It Work? - Ask TaqMan #34

        Copy number variation (CNV) is a type of structural variation that occurs when a DNA segment of 1 kb to several megabases in length is present in variable copy numbers compared to a reference genome

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